Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 SSR4P1-203ENST00000599569 2260 ntBASIC13.97□□□□□ -0.17
TMEM54Q969K7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AL844908.2-201ENST00000609461 460 ntBASIC13.96□□□□□ -0.17
TMEM54Q969K7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 AL590560.3-201ENST00000623350 461 ntBASIC13.96□□□□□ -0.17
TMEM54Q969K7 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM54Q969K7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM54Q969K7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM54Q969K7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.96□□□□□ -0.18
TMEM54Q969K7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM54Q969K7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM54Q969K7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms