Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.07□□□□□ -0.16
AP3S1Q92572 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 PRYP5-201ENST00000451909 266 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 MINOS1P3-201ENST00000457048 203 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 AC096582.2-201ENST00000510860 516 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 AC010203.1-204ENST00000548782 407 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.07□□□□□ -0.16
AP3S1Q92572 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
AP3S1Q92572 AC145285.6-201ENST00000604632 637 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S1Q92572 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
AP3S1Q92572 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.06□□□□□ -0.16
AP3S1Q92572 TSPY5P-201ENST00000426936 936 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 TSPY20P-201ENST00000450910 630 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 TSPY15P-201ENST00000457163 923 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.06□□□□□ -0.16
AP3S1Q92572 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 KRT8P26-201ENST00000534154 1276 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.06□□□□□ -0.16
AP3S1Q92572 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.06□□□□□ -0.16
AP3S1Q92572 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.06□□□□□ -0.16
AP3S1Q92572 AL365330.1-201ENST00000607459 531 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S1Q92572 PTENP1-202ENST00000532280 3996 ntBASIC14.06□□□□□ -0.16
AP3S1Q92572 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP3S1Q92572 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S1Q92572 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 AC006504.5-208ENST00000588784 2401 ntBASIC14.05□□□□□ -0.16
AP3S1Q92572 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.05□□□□□ -0.16
AP3S1Q92572 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP3S1Q92572 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms