Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 FO393414.2-201ENST00000405153 598 ntBASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AC241585.1-201ENST00000433527 519 ntBASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AL512361.1-201ENST00000554200 418 ntBASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 MIR6069-201ENST00000620069 79 ntBASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LPCAT1Q8NF37 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 AL590560.3-201ENST00000623350 461 ntBASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 HYMAI-201ENST00000635591 3347 ntBASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT1Q8NF37 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms