Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPEB3Q8NE35 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AC015911.4-201ENST00000588022 1070 ntBASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CPEB3Q8NE35 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SPDYE17-201ENST00000412399 783 ntBASIC13.93□□□□□ -0.18
CPEB3Q8NE35 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 FAM86GP-201ENST00000448322 971 ntBASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AC051619.7-201ENST00000568314 623 ntBASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPEB3Q8NE35 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms