Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 AC040169.1-201ENST00000565382 521 ntBASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 AC004790.2-201ENST00000623588 572 ntBASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.98■□□□□ 0.15
CRLF3Q8IUI8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 AC139530.3-201ENST00000620344 690 ntBASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRLF3Q8IUI8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 TCAF2P1-201ENST00000291129 2421 ntBASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AC011477.6-201ENST00000604980 1927 ntBASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 KRT18P2-201ENST00000447938 1258 ntBASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 GGTLC5P-201ENST00000617623 998 ntBASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CRLF3Q8IUI8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 CICP24-201ENST00000605464 2705 ntBASIC15.96■□□□□ 0.14
CRLF3Q8IUI8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CRLF3Q8IUI8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms