Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 LINC00528-201ENST00000600723 2160 ntBASIC12.71□□□□□ -0.37
FAM78BQ5VT40 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 SAPCD2P3-201ENST00000455031 850 ntBASIC12.71□□□□□ -0.37
FAM78BQ5VT40 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 AC007686.3-201ENST00000619017 3487 ntBASIC12.71□□□□□ -0.37
FAM78BQ5VT40 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FAM78BQ5VT40 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.71□□□□□ -0.38
FAM78BQ5VT40 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FAM78BQ5VT40 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AC008677.1-201ENST00000519230 1561 ntBASIC12.7□□□□□ -0.38
FAM78BQ5VT40 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 FGFR3P6-201ENST00000457012 610 ntBASIC12.7□□□□□ -0.38
FAM78BQ5VT40 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 AC107918.2-201ENST00000530817 355 ntBASIC12.7□□□□□ -0.38
FAM78BQ5VT40 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
FAM78BQ5VT40 SART3-203ENST00000546611 1184 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms