Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 BOLA2P3-201ENST00000404566 256 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AC119751.2-201ENST00000504529 210 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AP005482.1-201ENST00000563722 1273 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 MIR4313-201ENST00000580760 101 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 PCDH8P1-201ENST00000428983 2773 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.48■□□□□ 0.55
CERKLQ49MI3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.48■□□□□ 0.55
CERKLQ49MI3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CERKLQ49MI3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 AC018695.7-201ENST00000624587 2492 ntBASIC18.47■□□□□ 0.55
CERKLQ49MI3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.47■□□□□ 0.55
CERKLQ49MI3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 COX11-210ENST00000639671 696 ntBASIC18.47■□□□□ 0.55
CERKLQ49MI3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.47■□□□□ 0.55
CERKLQ49MI3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CERKLQ49MI3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 PTP4A1P2-201ENST00000546033 454 ntBASIC18.46■□□□□ 0.55
CERKLQ49MI3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CERKLQ49MI3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.46■□□□□ 0.55
CERKLQ49MI3 AL022328.1-201ENST00000610050 478 ntBASIC18.46■□□□□ 0.55
CERKLQ49MI3 AC133552.6-201ENST00000613406 534 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms