Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 BEND3P1-201ENST00000421591 1944 ntBASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 FAM86EP-206ENST00000510506 987 ntBASIC12.45□□□□□ -0.42
ERVFC1-1P60608 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 AC073592.5-201ENST00000624854 528 ntBASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 MIR662-201ENST00000384847 95 ntBASIC12.44□□□□□ -0.42
ERVFC1-1P60608 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 KRT18P56-201ENST00000507275 550 ntBASIC12.44□□□□□ -0.42
ERVFC1-1P60608 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 AL136038.3-201ENST00000561909 1096 ntBASIC12.44□□□□□ -0.42
ERVFC1-1P60608 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.44□□□□□ -0.42
ERVFC1-1P60608 AL138831.2-201ENST00000606564 490 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms