Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR4745-201ENST00000577608 62 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 AL391069.4-201ENST00000609583 481 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 AL162727.3-201ENST00000635661 2787 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.33■□□□□ 0.37
NCKAP1LP55160 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NCKAP1LP55160 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NCKAP1LP55160 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKAP1LP55160 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC236430.1-201ENST00000402231 743 ntBASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 TIMM17BP1-201ENST00000545713 516 ntBASIC17.33■□□□□ 0.36
NCKAP1LP55160 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 LINC02560-201ENST00000596379 459 ntBASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC008761.3-201ENST00000624803 892 ntBASIC17.33■□□□□ 0.36
NCKAP1LP55160 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NCKAP1LP55160 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKAP1LP55160 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 MEIS3P1-201ENST00000495167 958 ntBASIC17.32■□□□□ 0.36
NCKAP1LP55160 DOC2GP-202ENST00000514950 1163 ntBASIC17.32■□□□□ 0.36
NCKAP1LP55160 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 AC092127.1-201ENST00000567093 3455 ntBASIC17.32■□□□□ 0.36
NCKAP1LP55160 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKAP1LP55160 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKAP1LP55160 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 AC127383.1-201ENST00000444697 1800 ntBASIC17.31■□□□□ 0.36
NCKAP1LP55160 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKAP1LP55160 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKAP1LP55160 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms