Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HMGCLP35914 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGCLP35914 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGCLP35914 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 AC132872.4-202ENST00000622924 2756 ntBASIC15.79■□□□□ 0.12
HMGCLP35914 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGCLP35914 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.79■□□□□ 0.12
HMGCLP35914 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGCLP35914 AC114501.2-201ENST00000439631 535 ntBASIC15.79■□□□□ 0.12
HMGCLP35914 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGCLP35914 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.79■□□□□ 0.12
HMGCLP35914 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.79■□□□□ 0.12
HMGCLP35914 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HMGCLP35914 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 AC092127.1-201ENST00000567093 3455 ntBASIC15.79■□□□□ 0.12
HMGCLP35914 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HMGCLP35914 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGCLP35914 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGCLP35914 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.78■□□□□ 0.12
HMGCLP35914 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 RPL13P2-201ENST00000440687 659 ntBASIC15.78■□□□□ 0.12
HMGCLP35914 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.78■□□□□ 0.12
HMGCLP35914 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.78■□□□□ 0.12
HMGCLP35914 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 AC103702.1-201ENST00000548801 2630 ntBASIC15.78■□□□□ 0.12
HMGCLP35914 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HMGCLP35914 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.78■□□□□ 0.12
HMGCLP35914 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMGCLP35914 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.77■□□□□ 0.12
HMGCLP35914 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms