Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 FOXO1B-201ENST00000504678 1527 ntBASIC14.82□□□□□ -0.04
TNFRSF1BP20333 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 BNIP3P1-202ENST00000550043 1585 ntBASIC14.82□□□□□ -0.04
TNFRSF1BP20333 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 AC007686.3-201ENST00000619017 3487 ntBASIC14.82□□□□□ -0.04
TNFRSF1BP20333 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFRSF1BP20333 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 MIR4313-201ENST00000580760 101 ntBASIC14.81□□□□□ -0.04
TNFRSF1BP20333 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AC068137.2-201ENST00000605408 478 ntBASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms