Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.49■□□□□ 0.39
GAP43P17677 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GAP43P17677 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.49■□□□□ 0.39
GAP43P17677 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.49■□□□□ 0.39
GAP43P17677 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.49■□□□□ 0.39
GAP43P17677 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.49■□□□□ 0.39
GAP43P17677 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.49■□□□□ 0.39
GAP43P17677 SDHAP3-202ENST00000515467 728 ntBASIC17.49■□□□□ 0.39
GAP43P17677 RFPL4AP1-201ENST00000530883 850 ntBASIC17.49■□□□□ 0.39
GAP43P17677 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 AL844908.2-201ENST00000609461 460 ntBASIC17.49■□□□□ 0.39
GAP43P17677 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAP43P17677 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.49■□□□□ 0.39
GAP43P17677 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.49■□□□□ 0.39
GAP43P17677 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 AC105250.1-201ENST00000509378 2057 ntBASIC17.48■□□□□ 0.39
GAP43P17677 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.48■□□□□ 0.39
GAP43P17677 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.48■□□□□ 0.39
GAP43P17677 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.48■□□□□ 0.39
GAP43P17677 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.48■□□□□ 0.39
GAP43P17677 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GAP43P17677 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
GAP43P17677 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GAP43P17677 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAP43P17677 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.47■□□□□ 0.39
GAP43P17677 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
GAP43P17677 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GAP43P17677 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.47■□□□□ 0.39
GAP43P17677 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.47■□□□□ 0.39
GAP43P17677 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GAP43P17677 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAP43P17677 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.47■□□□□ 0.39
GAP43P17677 AC074338.1-201ENST00000416825 156 ntBASIC17.47■□□□□ 0.39
GAP43P17677 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.47■□□□□ 0.39
GAP43P17677 TSSK5P-201ENST00000423978 907 ntBASIC17.47■□□□□ 0.39
GAP43P17677 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.47■□□□□ 0.39
GAP43P17677 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.47■□□□□ 0.39
GAP43P17677 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.47■□□□□ 0.39
GAP43P17677 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.47■□□□□ 0.39
GAP43P17677 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.47■□□□□ 0.39
GAP43P17677 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
GAP43P17677 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms