Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.11■□□□□ 0.01
LRIT2A6NDA9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LRIT2A6NDA9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC092850.2-201ENST00000623821 2697 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC092127.1-201ENST00000567093 3455 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC241585.1-201ENST00000433527 519 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 RN7SL618P-201ENST00000477850 296 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC010336.2-201ENST00000564226 506 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 Z97205.2-201ENST00000564697 1639 ntBASIC15.1■□□□□ 0.01
LRIT2A6NDA9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRIT2A6NDA9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 TSSK5P-201ENST00000423978 907 ntBASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.09■□□□□ 0.01
LRIT2A6NDA9 IGHV3-42-201ENST00000520410 361 ntBASIC15.09■□□□□ 0.01
LRIT2A6NDA9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms