Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC025580.3-201ENST00000617932 1424 ntBASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 Z83851.2-201ENST00000609564 659 ntBASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 BCAR1-209ENST00000546196 1340 ntBASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-7A0A0A0MS04 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-7A0A0A0MS04 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 AL137784.3-201ENST00000623858 2288 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 FGD5P1-202ENST00000614866 2498 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 C18orf15-201ENST00000623680 2534 ntBASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-7A0A0A0MS04 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms