Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 RNU1-129P-201ENST00000384064 167 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AC093724.1-201ENST00000448659 1027 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 U1.21-201ENST00000580816 167 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AL365330.1-201ENST00000607459 531 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AC091076.1-201ENST00000610741 619 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 AC232323.1-201ENST00000540724 2099 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 REXO1L5P-201ENST00000622260 2098 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 LINC00552-201ENST00000625151 2579 ntBASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV18A0A075B6X5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 DUSP5P1-201ENST00000441325 1139 ntBASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 FGFR3P6-201ENST00000457012 610 ntBASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 MIR4515-201ENST00000584082 81 ntBASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AL031055.1-201ENST00000606362 631 ntBASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV18A0A075B6X5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms