Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AC087481.3-201ENST00000602886 1894 ntBASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 AC232323.1-201ENST00000540724 2099 ntBASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 REXO1L5P-201ENST00000622260 2098 ntBASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP4B1Q9Y6B7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AC087163.2-201ENST00000457299 853 ntBASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 RNA5SP416-201ENST00000516838 111 ntBASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AC140113.2-201ENST00000604370 208 ntBASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 AC129492.6-201ENST00000611383 1305 ntBASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP4B1Q9Y6B7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 PCGF3-213ENST00000620529 1899 ntBASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 KRT18P3-201ENST00000451602 1288 ntBASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 AC064836.3-201ENST00000607928 673 ntBASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 AC007686.3-201ENST00000619017 3487 ntBASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 AC005912.2-201ENST00000619492 2400 ntBASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.37■□□□□ 0.05
AP4B1Q9Y6B7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms