Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 AC079178.1-201ENST00000420915 656 ntBASIC17.81■□□□□ 0.44
TRIM17Q9Y577 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 NUP210P1-202ENST00000504322 710 ntBASIC17.81■□□□□ 0.44
TRIM17Q9Y577 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM17Q9Y577 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AC007274.2-201ENST00000421675 662 ntBASIC17.8■□□□□ 0.44
TRIM17Q9Y577 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AL596276.2-201ENST00000447525 331 ntBASIC17.8■□□□□ 0.44
TRIM17Q9Y577 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AP000346.4-201ENST00000614827 381 ntBASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AL390961.4-201ENST00000623958 2535 ntBASIC17.8■□□□□ 0.44
TRIM17Q9Y577 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM17Q9Y577 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 TPM3P8-201ENST00000330554 643 ntBASIC17.79■□□□□ 0.44
TRIM17Q9Y577 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 AC244157.2-201ENST00000616239 1006 ntBASIC17.79■□□□□ 0.44
TRIM17Q9Y577 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.79■□□□□ 0.44
TRIM17Q9Y577 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 AC008132.1-202ENST00000342005 1389 ntBASIC17.79■□□□□ 0.44
TRIM17Q9Y577 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM17Q9Y577 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM17Q9Y577 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms