Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 AL596087.1-201ENST00000400979 1969 ntBASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 CICP6-201ENST00000457191 2729 ntBASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 KRT43P-201ENST00000434019 910 ntBASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.95■□□□□ 0.46
CYP39A1Q9NYL5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 AC079328.2-201ENST00000561241 3354 ntBASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 AL662844.4-201ENST00000606367 2838 ntBASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 C1QBPP1-201ENST00000400117 770 ntBASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 KRT223P-202ENST00000449164 1292 ntBASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYP39A1Q9NYL5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 MTHFR-217ENST00000641820 1569 ntBASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 AC133552.6-201ENST00000613406 534 ntBASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYP39A1Q9NYL5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms