Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 AL590627.1-203ENST00000421194 1026 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE1Q99829 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE1Q99829 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.94■□□□□ 0.14
CPNE1Q99829 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.94■□□□□ 0.14
CPNE1Q99829 AC140113.2-201ENST00000604370 208 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 FAM197Y3-203ENST00000618346 717 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 AL136982.4-201ENST00000437689 1740 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE1Q99829 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CPNE1Q99829 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE1Q99829 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.93■□□□□ 0.14
CPNE1Q99829 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 AL450472.2-201ENST00000603663 1156 ntBASIC15.93■□□□□ 0.14
CPNE1Q99829 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE1Q99829 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE1Q99829 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE1Q99829 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE1Q99829 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CPNE1Q99829 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.92■□□□□ 0.14
CPNE1Q99829 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CPNE1Q99829 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE1Q99829 HLA-H-201ENST00000383620 1096 ntBASIC15.92■□□□□ 0.14
CPNE1Q99829 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms