Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 AC013467.2-201ENST00000605472 835 ntBASIC18.61■□□□□ 0.57
TRIM47Q96LD4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIM47Q96LD4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 CTBP2P5-201ENST00000454986 1264 ntBASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 AC008741.2-201ENST00000612792 3115 ntBASIC18.6■□□□□ 0.57
TRIM47Q96LD4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM47Q96LD4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 PDIA3P1-201ENST00000471856 1510 ntBASIC18.59■□□□□ 0.57
TRIM47Q96LD4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 KRT8P39-201ENST00000396270 1433 ntBASIC18.59■□□□□ 0.57
TRIM47Q96LD4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 AC004945.1-201ENST00000416738 983 ntBASIC18.59■□□□□ 0.57
TRIM47Q96LD4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM47Q96LD4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms