Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC242376.2-201ENST00000619355 883 ntBASIC13.57□□□□□ -0.24
LRRK2Q5S007 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 LINC02012-201ENST00000608206 1725 ntBASIC13.57□□□□□ -0.24
LRRK2Q5S007 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 KLF2P2-201ENST00000416807 1039 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC130709.1-201ENST00000484779 1212 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 SCARNA21-201ENST00000517026 139 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AP003171.2-201ENST00000528208 925 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC092171.5-201ENST00000608012 942 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC103691.2-201ENST00000618824 433 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AL136309.1-201ENST00000403917 691 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 FAM8A4P-201ENST00000435433 1213 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AL023803.2-201ENST00000620080 638 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 AL138781.2-201ENST00000617896 1843 ntBASIC13.56□□□□□ -0.24
LRRK2Q5S007 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRK2Q5S007 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRK2Q5S007 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 AC010234.1-201ENST00000494599 870 ntBASIC13.55□□□□□ -0.24
LRRK2Q5S007 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRK2Q5S007 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRK2Q5S007 AP001582.1-201ENST00000525856 295 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms