Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC018892.3-201ENST00000623986 2499 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.4□□□□□ -0.11
APOBEC1P41238 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
APOBEC1P41238 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
APOBEC1P41238 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
APOBEC1P41238 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 AC136604.1-201ENST00000418535 575 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 HIST3H2BA-201ENST00000436555 524 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 AC027369.6-201ENST00000525520 931 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 MIR4313-201ENST00000580760 101 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 AL138828.2-201ENST00000615812 383 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBEC1P41238 PKD1P5-201ENST00000532415 10291 ntBASIC14.39□□□□□ -0.11
APOBEC1P41238 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBEC1P41238 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOBEC1P41238 AP003680.1-201ENST00000598970 3660 ntBASIC14.38□□□□□ -0.11
APOBEC1P41238 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOBEC1P41238 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
APOBEC1P41238 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.38□□□□□ -0.11
APOBEC1P41238 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.38□□□□□ -0.11
APOBEC1P41238 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.38□□□□□ -0.11
APOBEC1P41238 SPDYE12P-201ENST00000618416 771 ntBASIC14.38□□□□□ -0.11
APOBEC1P41238 AL033527.5-202ENST00000641632 1098 ntBASIC14.38□□□□□ -0.11
APOBEC1P41238 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms