Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.97■□□□□ 0.47
PRPHP41219 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PRPHP41219 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRPHP41219 FO538757.1-201ENST00000623083 1397 ntBASIC17.96■□□□□ 0.47
PRPHP41219 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 RPL37AP1-201ENST00000412502 279 ntBASIC17.96■□□□□ 0.47
PRPHP41219 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.96■□□□□ 0.47
PRPHP41219 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.96■□□□□ 0.47
PRPHP41219 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.96■□□□□ 0.47
PRPHP41219 AC140878.1-201ENST00000565277 250 ntBASIC17.96■□□□□ 0.47
PRPHP41219 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.96■□□□□ 0.47
PRPHP41219 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRPHP41219 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRPHP41219 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRPHP41219 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
PRPHP41219 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRPHP41219 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 CICP13-201ENST00000422015 2789 ntBASIC17.95■□□□□ 0.46
PRPHP41219 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PRPHP41219 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.95■□□□□ 0.46
PRPHP41219 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 SERBP1P3-201ENST00000459980 809 ntBASIC17.95■□□□□ 0.46
PRPHP41219 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 AC125807.1-201ENST00000483097 614 ntBASIC17.95■□□□□ 0.46
PRPHP41219 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.95■□□□□ 0.46
PRPHP41219 SPDYE12P-201ENST00000618416 771 ntBASIC17.95■□□□□ 0.46
PRPHP41219 AC093028.1-201ENST00000622998 982 ntBASIC17.95■□□□□ 0.46
PRPHP41219 AC105250.1-201ENST00000509378 2057 ntBASIC17.95■□□□□ 0.46
PRPHP41219 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRPHP41219 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 KRT18P28-201ENST00000453838 1332 ntBASIC17.95■□□□□ 0.46
PRPHP41219 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRPHP41219 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRPHP41219 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRPHP41219 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRPHP41219 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.94■□□□□ 0.46
PRPHP41219 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRPHP41219 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.94■□□□□ 0.46
PRPHP41219 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.94■□□□□ 0.46
PRPHP41219 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.94■□□□□ 0.46
PRPHP41219 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.94■□□□□ 0.46
PRPHP41219 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms