Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GDNFP39905 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDNFP39905 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDNFP39905 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GDNFP39905 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.96□□□□□ -0.18
GDNFP39905 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.96□□□□□ -0.18
GDNFP39905 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 TPM4P1-201ENST00000436100 807 ntBASIC13.95□□□□□ -0.18
GDNFP39905 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.95□□□□□ -0.18
GDNFP39905 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GDNFP39905 AC117500.6-201ENST00000624871 588 ntBASIC13.95□□□□□ -0.18
GDNFP39905 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GDNFP39905 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.95□□□□□ -0.18
GDNFP39905 AC005622.1-201ENST00000636801 1703 ntBASIC13.95□□□□□ -0.18
GDNFP39905 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.95□□□□□ -0.18
GDNFP39905 AL390755.1-201ENST00000623716 2027 ntBASIC13.95□□□□□ -0.18
GDNFP39905 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GDNFP39905 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 AC013726.1-201ENST00000563747 2285 ntBASIC13.94□□□□□ -0.18
GDNFP39905 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 AC090616.6-203ENST00000579186 1945 ntBASIC13.94□□□□□ -0.18
GDNFP39905 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.94□□□□□ -0.18
GDNFP39905 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.94□□□□□ -0.18
GDNFP39905 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.94□□□□□ -0.18
GDNFP39905 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.94□□□□□ -0.18
GDNFP39905 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 AC091167.2-201ENST00000579581 588 ntBASIC13.94□□□□□ -0.18
GDNFP39905 MIR1199-201ENST00000621445 119 ntBASIC13.94□□□□□ -0.18
GDNFP39905 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GDNFP39905 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms