Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.48■□□□□ 0.23
SCNN1AP37088 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 RPL5P21-201ENST00000404620 815 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.48■□□□□ 0.23
SCNN1AP37088 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 RNA5SP421-201ENST00000516864 134 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SCNN1AP37088 AC015910.1-201ENST00000579400 975 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.48■□□□□ 0.23
SCNN1AP37088 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCNN1AP37088 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.48■□□□□ 0.23
SCNN1AP37088 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 AC138969.3-201ENST00000546612 1459 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 AC138932.2-201ENST00000548268 1459 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 AC126755.4-201ENST00000549796 1459 ntBASIC16.48■□□□□ 0.23
SCNN1AP37088 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCNN1AP37088 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SCNN1AP37088 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 AC008738.7-201ENST00000609744 511 ntBASIC16.47■□□□□ 0.23
SCNN1AP37088 AC079416.2-201ENST00000625035 1193 ntBASIC16.47■□□□□ 0.23
SCNN1AP37088 AC004461.2-201ENST00000629517 803 ntBASIC16.47■□□□□ 0.23
SCNN1AP37088 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 AC087481.3-201ENST00000602886 1894 ntBASIC16.47■□□□□ 0.23
SCNN1AP37088 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
SCNN1AP37088 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 AC092850.2-201ENST00000623821 2697 ntBASIC16.47■□□□□ 0.23
SCNN1AP37088 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCNN1AP37088 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SCNN1AP37088 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCNN1AP37088 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.46■□□□□ 0.23
SCNN1AP37088 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
SCNN1AP37088 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SCNN1AP37088 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SCNN1AP37088 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCNN1AP37088 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.46■□□□□ 0.23
SCNN1AP37088 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.46■□□□□ 0.23
SCNN1AP37088 SSR4P1-203ENST00000599569 2260 ntBASIC16.46■□□□□ 0.23
SCNN1AP37088 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms