Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ABCD3P28288 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ABCD3P28288 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 HMGN1P19-201ENST00000436976 333 ntBASIC14.68□□□□□ -0.06
ABCD3P28288 AC009477.1-201ENST00000452936 217 ntBASIC14.68□□□□□ -0.06
ABCD3P28288 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 ZNF890P-202ENST00000530367 1156 ntBASIC14.68□□□□□ -0.06
ABCD3P28288 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCD3P28288 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.68□□□□□ -0.06
ABCD3P28288 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 AC022144.1-201ENST00000602255 1580 ntBASIC14.68□□□□□ -0.06
ABCD3P28288 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCD3P28288 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCD3P28288 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCD3P28288 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
ABCD3P28288 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCD3P28288 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCD3P28288 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.67□□□□□ -0.06
ABCD3P28288 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCD3P28288 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.67□□□□□ -0.06
ABCD3P28288 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCD3P28288 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCD3P28288 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCD3P28288 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCD3P28288 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms