Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDRT1O95170 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
CDRT1O95170 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 ARMC10P1-201ENST00000313754 855 ntBASIC14.28□□□□□ -0.12
CDRT1O95170 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 PTCHD3P3-201ENST00000403073 906 ntBASIC14.28□□□□□ -0.12
CDRT1O95170 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 AP001350.2-201ENST00000625104 1094 ntBASIC14.28□□□□□ -0.12
CDRT1O95170 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CDRT1O95170 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.28□□□□□ -0.12
CDRT1O95170 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.28□□□□□ -0.12
CDRT1O95170 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDRT1O95170 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDRT1O95170 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.27□□□□□ -0.12
CDRT1O95170 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.27□□□□□ -0.12
CDRT1O95170 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
CDRT1O95170 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.27□□□□□ -0.12
CDRT1O95170 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.27□□□□□ -0.12
CDRT1O95170 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDRT1O95170 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CDRT1O95170 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CDRT1O95170 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT1O95170 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDRT1O95170 SART3-203ENST00000546611 1184 ntBASIC14.27□□□□□ -0.13
CDRT1O95170 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.27□□□□□ -0.13
CDRT1O95170 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT1O95170 AC087641.1-201ENST00000557561 1021 ntBASIC14.27□□□□□ -0.13
CDRT1O95170 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.27□□□□□ -0.13
CDRT1O95170 MTDHP4-201ENST00000600287 670 ntBASIC14.27□□□□□ -0.13
CDRT1O95170 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 AC005840.4-201ENST00000541242 2494 ntBASIC14.27□□□□□ -0.13
CDRT1O95170 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT1O95170 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.27□□□□□ -0.13
CDRT1O95170 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDRT1O95170 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
CDRT1O95170 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDRT1O95170 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms