Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 C18orf15-201ENST00000623680 2534 ntBASIC16.54■□□□□ 0.24
LRRC38Q5VT99 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC38Q5VT99 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 AP000344.2-201ENST00000512987 629 ntBASIC16.53■□□□□ 0.24
LRRC38Q5VT99 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 MIR4469-201ENST00000583919 79 ntBASIC16.53■□□□□ 0.24
LRRC38Q5VT99 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRC38Q5VT99 KRT8P44-201ENST00000441609 1350 ntBASIC16.52■□□□□ 0.24
LRRC38Q5VT99 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 AC126365.1-201ENST00000578585 1514 ntBASIC16.52■□□□□ 0.24
LRRC38Q5VT99 AZGP1P1-201ENST00000411909 902 ntBASIC16.52■□□□□ 0.24
LRRC38Q5VT99 GPS2P2-201ENST00000430745 888 ntBASIC16.52■□□□□ 0.24
LRRC38Q5VT99 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRC38Q5VT99 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRRC38Q5VT99 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC38Q5VT99 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms