Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM3BP58499 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 AL592071.1-201ENST00000611956 408 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 AC006504.5-208ENST00000588784 2401 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 AC097374.2-201ENST00000618617 1306 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 AC233702.3-201ENST00000578656 1387 ntBASIC12.53□□□□□ -0.4
FAM3BP58499 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM3BP58499 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM3BP58499 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
FAM3BP58499 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
FAM3BP58499 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
FAM3BP58499 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
FAM3BP58499 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
FAM3BP58499 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM3BP58499 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
FAM3BP58499 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 POM121L3P-201ENST00000419331 1163 ntBASIC12.52□□□□□ -0.41
FAM3BP58499 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 KRT17P6-201ENST00000453795 1220 ntBASIC12.52□□□□□ -0.41
FAM3BP58499 KRT16P4-201ENST00000453883 522 ntBASIC12.52□□□□□ -0.41
FAM3BP58499 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.52□□□□□ -0.41
FAM3BP58499 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.52□□□□□ -0.41
FAM3BP58499 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.52□□□□□ -0.41
FAM3BP58499 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 RN7SL510P-201ENST00000581311 263 ntBASIC12.52□□□□□ -0.41
FAM3BP58499 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
FAM3BP58499 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM3BP58499 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM3BP58499 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM3BP58499 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM3BP58499 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM3BP58499 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM3BP58499 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM3BP58499 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
FAM3BP58499 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM3BP58499 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM3BP58499 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM3BP58499 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms