Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIPPLY3P57055 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC132938.6-201ENST00000623828 1655 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC097065.1-201ENST00000425737 517 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 AL139008.1-201ENST00000437894 228 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 RN7SL8P-201ENST00000461771 266 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC125604.1-201ENST00000496255 707 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC005695.3-201ENST00000614522 232 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 KRT8P37-201ENST00000451609 1420 ntBASIC13.29□□□□□ -0.28
RIPPLY3P57055 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.29□□□□□ -0.28
RIPPLY3P57055 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIPPLY3P57055 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 LINC00896-202ENST00000609602 2128 ntBASIC13.28□□□□□ -0.28
RIPPLY3P57055 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 AC023824.1-201ENST00000562945 2975 ntBASIC13.28□□□□□ -0.28
RIPPLY3P57055 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 AL589987.1-201ENST00000453380 819 ntBASIC13.28□□□□□ -0.28
RIPPLY3P57055 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 RARRES2P5-201ENST00000564013 466 ntBASIC13.28□□□□□ -0.28
RIPPLY3P57055 FGFR3P5-201ENST00000564496 886 ntBASIC13.28□□□□□ -0.28
RIPPLY3P57055 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms