Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK2P53671 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK2P53671 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK2P53671 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.1■□□□□ 0.17
LIMK2P53671 AC008267.7-201ENST00000624570 1194 ntBASIC16.1■□□□□ 0.17
LIMK2P53671 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.1■□□□□ 0.17
LIMK2P53671 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 TUBB3P1-201ENST00000405796 1332 ntBASIC16.1■□□□□ 0.17
LIMK2P53671 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LIMK2P53671 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LIMK2P53671 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK2P53671 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK2P53671 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LIMK2P53671 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 AC134407.2-201ENST00000625089 1978 ntBASIC16.09■□□□□ 0.17
LIMK2P53671 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LIMK2P53671 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.09■□□□□ 0.17
LIMK2P53671 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 RNA5SP421-201ENST00000516864 134 ntBASIC16.09■□□□□ 0.17
LIMK2P53671 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.09■□□□□ 0.17
LIMK2P53671 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.09■□□□□ 0.17
LIMK2P53671 AL390955.2-201ENST00000603032 514 ntBASIC16.09■□□□□ 0.17
LIMK2P53671 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.09■□□□□ 0.17
LIMK2P53671 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.09■□□□□ 0.17
LIMK2P53671 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LIMK2P53671 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIMK2P53671 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LIMK2P53671 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.08■□□□□ 0.17
LIMK2P53671 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
LIMK2P53671 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIMK2P53671 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.08■□□□□ 0.17
LIMK2P53671 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.08■□□□□ 0.16
LIMK2P53671 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.08■□□□□ 0.16
LIMK2P53671 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms