Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.7■□□□□ 0.58
MRE11P49959 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.7■□□□□ 0.58
MRE11P49959 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.7■□□□□ 0.58
MRE11P49959 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.7■□□□□ 0.58
MRE11P49959 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.7■□□□□ 0.58
MRE11P49959 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.7■□□□□ 0.58
MRE11P49959 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MRE11P49959 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MRE11P49959 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRE11P49959 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.7■□□□□ 0.58
MRE11P49959 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.7■□□□□ 0.58
MRE11P49959 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.69■□□□□ 0.58
MRE11P49959 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.69■□□□□ 0.58
MRE11P49959 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.69■□□□□ 0.58
MRE11P49959 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.69■□□□□ 0.58
MRE11P49959 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 AC002347.1-201ENST00000569543 541 ntBASIC18.69■□□□□ 0.58
MRE11P49959 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.69■□□□□ 0.58
MRE11P49959 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.69■□□□□ 0.58
MRE11P49959 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MRE11P49959 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
MRE11P49959 AGAP7P-201ENST00000582299 2062 ntBASIC18.69■□□□□ 0.58
MRE11P49959 AGAP14-201ENST00000624701 2060 ntBASIC18.69■□□□□ 0.58
MRE11P49959 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRE11P49959 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.69■□□□□ 0.58
MRE11P49959 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MRE11P49959 GPAA1P2-202ENST00000606848 1787 ntBASIC18.68■□□□□ 0.58
MRE11P49959 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MRE11P49959 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 HNRNPDP1-201ENST00000439535 754 ntBASIC18.68■□□□□ 0.58
MRE11P49959 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.68■□□□□ 0.58
MRE11P49959 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 AC005332.3-201ENST00000589904 676 ntBASIC18.68■□□□□ 0.58
MRE11P49959 AL096865.1-201ENST00000606796 927 ntBASIC18.68■□□□□ 0.58
MRE11P49959 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.68■□□□□ 0.58
MRE11P49959 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.68■□□□□ 0.58
MRE11P49959 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms