Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.57■□□□□ 0.24
H2AFXP16104 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.57■□□□□ 0.24
H2AFXP16104 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.57■□□□□ 0.24
H2AFXP16104 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 IGHV3-41-201ENST00000613121 348 ntBASIC16.57■□□□□ 0.24
H2AFXP16104 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.57■□□□□ 0.24
H2AFXP16104 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.57■□□□□ 0.24
H2AFXP16104 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2AFXP16104 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.56■□□□□ 0.24
H2AFXP16104 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 WASH3P-207ENST00000560956 1394 ntBASIC16.56■□□□□ 0.24
H2AFXP16104 FO538757.1-201ENST00000623083 1397 ntBASIC16.56■□□□□ 0.24
H2AFXP16104 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.56■□□□□ 0.24
H2AFXP16104 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
H2AFXP16104 TSPY22P-201ENST00000427496 604 ntBASIC16.56■□□□□ 0.24
H2AFXP16104 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.56■□□□□ 0.24
H2AFXP16104 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.56■□□□□ 0.24
H2AFXP16104 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.56■□□□□ 0.24
H2AFXP16104 ITM2C-210ENST00000620962 501 ntBASIC16.56■□□□□ 0.24
H2AFXP16104 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.56■□□□□ 0.24
H2AFXP16104 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.56■□□□□ 0.24
H2AFXP16104 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
H2AFXP16104 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2AFXP16104 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
H2AFXP16104 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
H2AFXP16104 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.55■□□□□ 0.24
H2AFXP16104 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.55■□□□□ 0.24
H2AFXP16104 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
H2AFXP16104 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
H2AFXP16104 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.55■□□□□ 0.24
H2AFXP16104 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2AFXP16104 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.55■□□□□ 0.24
H2AFXP16104 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms