Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.7□□□□□ -0.06
THBS1P07996 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.7□□□□□ -0.06
THBS1P07996 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.7□□□□□ -0.06
THBS1P07996 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 MIR4313-201ENST00000580760 101 ntBASIC14.7□□□□□ -0.06
THBS1P07996 AC022145.2-201ENST00000598203 171 ntBASIC14.7□□□□□ -0.06
THBS1P07996 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.7□□□□□ -0.06
THBS1P07996 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.7□□□□□ -0.06
THBS1P07996 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.7□□□□□ -0.06
THBS1P07996 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
THBS1P07996 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
THBS1P07996 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 KRT18P28-201ENST00000453838 1332 ntBASIC14.69□□□□□ -0.06
THBS1P07996 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
THBS1P07996 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 AC018892.3-201ENST00000623986 2499 ntBASIC14.69□□□□□ -0.06
THBS1P07996 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 AC090616.6-203ENST00000579186 1945 ntBASIC14.69□□□□□ -0.06
THBS1P07996 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.69□□□□□ -0.06
THBS1P07996 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.69□□□□□ -0.06
THBS1P07996 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 CEND1P1-201ENST00000451006 455 ntBASIC14.69□□□□□ -0.06
THBS1P07996 PHKG1P2-201ENST00000457537 863 ntBASIC14.69□□□□□ -0.06
THBS1P07996 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
THBS1P07996 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.69□□□□□ -0.06
THBS1P07996 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.69□□□□□ -0.06
THBS1P07996 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.69□□□□□ -0.06
THBS1P07996 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
THBS1P07996 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
THBS1P07996 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS1P07996 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
THBS1P07996 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS1P07996 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
THBS1P07996 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.68□□□□□ -0.06
THBS1P07996 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
THBS1P07996 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms