Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN1P07384 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN1P07384 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN1P07384 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 WASH6P-202ENST00000359512 1437 ntBASIC15.77■□□□□ 0.12
CAPN1P07384 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CAPN1P07384 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN1P07384 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.77■□□□□ 0.12
CAPN1P07384 KRT18P32-201ENST00000424695 1287 ntBASIC15.77■□□□□ 0.12
CAPN1P07384 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.77■□□□□ 0.12
CAPN1P07384 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN1P07384 SPCS2P1-201ENST00000561636 679 ntBASIC15.77■□□□□ 0.12
CAPN1P07384 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN1P07384 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.77■□□□□ 0.12
CAPN1P07384 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN1P07384 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.77■□□□□ 0.11
CAPN1P07384 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CAPN1P07384 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CAPN1P07384 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CAPN1P07384 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CAPN1P07384 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPN1P07384 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CAPN1P07384 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPN1P07384 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 AC092384.3-202ENST00000564646 2873 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN1P07384 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 KRT8P23-201ENST00000560090 1207 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPN1P07384 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 MIR3197-201ENST00000582241 73 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 AC005498.2-205ENST00000593218 784 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 AP001059.3-201ENST00000619053 235 ntBASIC15.76■□□□□ 0.11
CAPN1P07384 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPN1P07384 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPN1P07384 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CAPN1P07384 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPN1P07384 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 AC073439.1-201ENST00000624121 1774 ntBASIC15.75■□□□□ 0.11
CAPN1P07384 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPN1P07384 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPN1P07384 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPN1P07384 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms