Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.48□□□□□ -0.57
PAX4O43316 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.48□□□□□ -0.57
PAX4O43316 RPSAP43-201ENST00000402237 625 ntBASIC11.48□□□□□ -0.57
PAX4O43316 AC211486.1-202ENST00000416371 468 ntBASIC11.48□□□□□ -0.57
PAX4O43316 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.48□□□□□ -0.57
PAX4O43316 AC098859.1-201ENST00000502915 1238 ntBASIC11.48□□□□□ -0.57
PAX4O43316 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 AC211476.1-201ENST00000503899 468 ntBASIC11.48□□□□□ -0.57
PAX4O43316 KRT8P48-201ENST00000515599 1220 ntBASIC11.48□□□□□ -0.57
PAX4O43316 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
PAX4O43316 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.48□□□□□ -0.57
PAX4O43316 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.48□□□□□ -0.57
PAX4O43316 KRT8P23-201ENST00000560090 1207 ntBASIC11.48□□□□□ -0.57
PAX4O43316 AC243562.1-201ENST00000560672 389 ntBASIC11.48□□□□□ -0.57
PAX4O43316 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.48□□□□□ -0.57
PAX4O43316 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 SPTSSB-204ENST00000617024 1292 ntBASIC11.48□□□□□ -0.57
PAX4O43316 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
PAX4O43316 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 ST20-AS1-201ENST00000560255 4223 ntBASIC11.48□□□□□ -0.57
PAX4O43316 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 AL592424.1-201ENST00000563624 1536 ntBASIC11.48□□□□□ -0.57
PAX4O43316 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 MTHFR-217ENST00000641820 1569 ntBASIC11.48□□□□□ -0.57
PAX4O43316 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.48□□□□□ -0.57
PAX4O43316 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
PAX4O43316 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
PAX4O43316 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PAX4O43316 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PAX4O43316 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PAX4O43316 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PAX4O43316 AC126335.2-201ENST00000623362 4637 ntBASIC11.47□□□□□ -0.57
PAX4O43316 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms