Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 AC097359.2-201ENST00000604992 2389 ntBASIC15.7■□□□□ 0.1
VGLL3A8MV65 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL3A8MV65 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VGLL3A8MV65 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 FAM197Y1-201ENST00000421178 764 ntBASIC15.69■□□□□ 0.1
VGLL3A8MV65 AL355355.2-201ENST00000442321 338 ntBASIC15.69■□□□□ 0.1
VGLL3A8MV65 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL3A8MV65 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL3A8MV65 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MEX3B-202ENST00000558133 4333 ntBASIC15.68■□□□□ 0.1
VGLL3A8MV65 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 NUDT16P1-203ENST00000513809 620 ntBASIC15.68■□□□□ 0.1
VGLL3A8MV65 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 AC015819.3-201ENST00000624305 2674 ntBASIC15.68■□□□□ 0.1
VGLL3A8MV65 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL3A8MV65 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL3A8MV65 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms