Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 AL359711.2-201ENST00000563105 872 ntBASIC21.62■■□□□ 1.05
NINLQ9Y2I6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 KRT8P22-201ENST00000562317 1415 ntBASIC21.62■■□□□ 1.05
NINLQ9Y2I6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AC134915.1-201ENST00000426461 574 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AC119751.2-201ENST00000504529 210 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 CU634019.7-201ENST00000624153 1185 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 FP236241.2-201ENST00000624906 1185 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 LINC02447-202ENST00000501888 2146 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 DOC2GP-204ENST00000639052 2548 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 VDAC1P7-201ENST00000462417 847 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 AC026410.3-201ENST00000514280 936 ntBASIC21.61■■□□□ 1.05
NINLQ9Y2I6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.61■■□□□ 1.05
NINLQ9Y2I6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 ACTG1P3-201ENST00000431775 1114 ntBASIC21.6■■□□□ 1.05
NINLQ9Y2I6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
NINLQ9Y2I6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms