Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 AC104794.3-201ENST00000566840 1248 ntBASIC15.71■□□□□ 0.11
SATB2Q9UPW6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 AL139011.1-202ENST00000642063 584 ntBASIC15.71■□□□□ 0.11
SATB2Q9UPW6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SATB2Q9UPW6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.71■□□□□ 0.11
SATB2Q9UPW6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SATB2Q9UPW6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SATB2Q9UPW6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SATB2Q9UPW6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.71■□□□□ 0.1
SATB2Q9UPW6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 DGCR5-201ENST00000399539 862 ntBASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 INE1-201ENST00000456273 945 ntBASIC15.7■□□□□ 0.1
SATB2Q9UPW6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 BANF1P1-201ENST00000553684 263 ntBASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.7■□□□□ 0.1
SATB2Q9UPW6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AP006294.1-201ENST00000415407 339 ntBASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AL080243.2-201ENST00000418783 582 ntBASIC15.69■□□□□ 0.1
SATB2Q9UPW6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 RN7SL752P-201ENST00000463779 287 ntBASIC15.69■□□□□ 0.1
SATB2Q9UPW6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AC098859.1-201ENST00000502915 1238 ntBASIC15.69■□□□□ 0.1
SATB2Q9UPW6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.69■□□□□ 0.1
SATB2Q9UPW6 AL079307.3-201ENST00000556114 283 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms