Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AL161772.1-201ENST00000610494 4412 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AC006058.4-201ENST00000624016 1670 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
VGLL1Q99990 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
VGLL1Q99990 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
VGLL1Q99990 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.17□□□□□ -0.46
VGLL1Q99990 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
VGLL1Q99990 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 KRT18P67-201ENST00000432816 1264 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 PRSS29P-201ENST00000440800 595 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 EMBP1-201ENST00000458200 901 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 AC092910.1-201ENST00000482027 1129 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 AC108751.1-201ENST00000490852 363 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.17□□□□□ -0.46
VGLL1Q99990 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 TMBIM7P-203ENST00000641617 1718 ntBASIC12.17□□□□□ -0.46
VGLL1Q99990 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VGLL1Q99990 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
VGLL1Q99990 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VGLL1Q99990 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.16□□□□□ -0.46
VGLL1Q99990 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VGLL1Q99990 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.16□□□□□ -0.46
VGLL1Q99990 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.16□□□□□ -0.46
VGLL1Q99990 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VGLL1Q99990 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms