Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 SRC-202ENST00000373558 4304 ntTSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ARID3AQ99856 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.31■□□□□ 0.52
ARID3AQ99856 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 RPS15P9-201ENST00000494093 319 ntBASIC18.31■□□□□ 0.52
ARID3AQ99856 AC136632.2-201ENST00000512891 861 ntBASIC18.31■□□□□ 0.52
ARID3AQ99856 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.31■□□□□ 0.52
ARID3AQ99856 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 TERC-201ENST00000602385 541 ntBASIC18.31■□□□□ 0.52
ARID3AQ99856 AL356488.2-201ENST00000602755 427 ntBASIC18.31■□□□□ 0.52
ARID3AQ99856 AC117500.6-201ENST00000624871 588 ntBASIC18.31■□□□□ 0.52
ARID3AQ99856 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.31■□□□□ 0.52
ARID3AQ99856 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ARID3AQ99856 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
ARID3AQ99856 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARID3AQ99856 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 PPT1-215ENST00000641471 2368 ntBASIC18.3■□□□□ 0.52
ARID3AQ99856 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
ARID3AQ99856 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.3■□□□□ 0.52
ARID3AQ99856 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 PAWRP1-201ENST00000451083 565 ntBASIC18.3■□□□□ 0.52
ARID3AQ99856 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 AC092910.1-201ENST00000482027 1129 ntBASIC18.3■□□□□ 0.52
ARID3AQ99856 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.3■□□□□ 0.52
ARID3AQ99856 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
ARID3AQ99856 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.3■□□□□ 0.52
ARID3AQ99856 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ARID3AQ99856 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 AC126335.2-201ENST00000623362 4637 ntBASIC18.3■□□□□ 0.52
ARID3AQ99856 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARID3AQ99856 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
ARID3AQ99856 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 PI4KAP1-204ENST00000612579 1703 ntBASIC18.29■□□□□ 0.52
ARID3AQ99856 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.29■□□□□ 0.52
ARID3AQ99856 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARID3AQ99856 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ARID3AQ99856 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.29■□□□□ 0.52
ARID3AQ99856 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 AP001005.1-201ENST00000571755 1248 ntBASIC18.29■□□□□ 0.52
ARID3AQ99856 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.29■□□□□ 0.52
ARID3AQ99856 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms