Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 AL136982.4-201ENST00000437689 1740 ntBASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 HYMAI-201ENST00000635591 3347 ntBASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 AC022188.1-201ENST00000620960 1664 ntBASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
FNDC9Q8TBE3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC006449.6-201ENST00000612330 2296 ntBASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 TSPY16P-201ENST00000449843 468 ntBASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
FNDC9Q8TBE3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms