Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 AC005498.2-205ENST00000593218 784 ntBASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 AC100757.3-201ENST00000622361 1406 ntBASIC16.79■□□□□ 0.28
SCUBE3Q8IX30 AC022188.1-201ENST00000620960 1664 ntBASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL450472.2-201ENST00000603663 1156 ntBASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AL390754.1-201ENST00000619088 582 ntBASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.78■□□□□ 0.28
SCUBE3Q8IX30 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 MIR4745-201ENST00000577608 62 ntBASIC16.77■□□□□ 0.28
SCUBE3Q8IX30 AL033527.5-202ENST00000641632 1098 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms