Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC003101.2-201ENST00000612557 442 ntBASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC007967.4-201ENST00000614700 386 ntBASIC14.47□□□□□ -0.09
ATG4DQ86TL0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC126177.1-201ENST00000547829 2218 ntBASIC14.47□□□□□ -0.09
ATG4DQ86TL0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 AC104640.1-201ENST00000562617 2109 ntBASIC14.47□□□□□ -0.09
ATG4DQ86TL0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4DQ86TL0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SSR4P1-203ENST00000599569 2260 ntBASIC14.46□□□□□ -0.09
ATG4DQ86TL0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
ATG4DQ86TL0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.46□□□□□ -0.09
ATG4DQ86TL0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AP001059.3-201ENST00000619053 235 ntBASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4DQ86TL0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 AC092127.1-201ENST00000567093 3455 ntBASIC14.46□□□□□ -0.1
ATG4DQ86TL0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.46□□□□□ -0.1
ATG4DQ86TL0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms