Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AC018892.3-201ENST00000623986 2499 ntBASIC16.58■□□□□ 0.24
TPGS2Q68CL5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TPGS2Q68CL5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TPGS2Q68CL5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 AL596087.1-201ENST00000400979 1969 ntBASIC16.57■□□□□ 0.24
TPGS2Q68CL5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 AC068587.3-201ENST00000526613 355 ntBASIC16.57■□□□□ 0.24
TPGS2Q68CL5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 SNX29P1-201ENST00000548357 1007 ntBASIC16.57■□□□□ 0.24
TPGS2Q68CL5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 AP001063.1-201ENST00000568332 529 ntBASIC16.57■□□□□ 0.24
TPGS2Q68CL5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TPGS2Q68CL5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 NKILA-202ENST00000614771 2598 ntBASIC16.56■□□□□ 0.24
TPGS2Q68CL5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 AC026410.3-201ENST00000514280 936 ntBASIC16.56■□□□□ 0.24
TPGS2Q68CL5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 CLUHP6-201ENST00000580789 941 ntBASIC16.56■□□□□ 0.24
TPGS2Q68CL5 MIR4259-201ENST00000584466 101 ntBASIC16.56■□□□□ 0.24
TPGS2Q68CL5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 AC093813.1-201ENST00000605066 256 ntBASIC16.56■□□□□ 0.24
TPGS2Q68CL5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPGS2Q68CL5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 AP001889.1-201ENST00000525414 633 ntBASIC16.55■□□□□ 0.24
TPGS2Q68CL5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPGS2Q68CL5 PCDHA12-202ENST00000613593 2588 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms