Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 FAAHP1-202ENST00000446499 1238 ntBASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ANKRD55Q3KP44 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 DUSP5P1-201ENST00000441325 1139 ntBASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ANKRD55Q3KP44 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ANKRD55Q3KP44 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms