Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GABREP78334 LINC01144-201ENST00000626198 1710 ntBASIC15.14■□□□□ 0.01
GABREP78334 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GABREP78334 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
GABREP78334 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABREP78334 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GABREP78334 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 AC004987.2-201ENST00000395959 1148 ntBASIC15.13■□□□□ 0.01
GABREP78334 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 AZGP1P1-201ENST00000411909 902 ntBASIC15.13■□□□□ 0.01
GABREP78334 YBX1P6-201ENST00000442962 1002 ntBASIC15.13■□□□□ 0.01
GABREP78334 RPL13AP25-201ENST00000484130 612 ntBASIC15.13■□□□□ 0.01
GABREP78334 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.13■□□□□ 0.01
GABREP78334 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.13■□□□□ 0.01
GABREP78334 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.13■□□□□ 0.01
GABREP78334 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
GABREP78334 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GABREP78334 AC084018.2-201ENST00000613093 2607 ntBASIC15.13■□□□□ 0.01
GABREP78334 INTS4P2-202ENST00000614726 2019 ntBASIC15.13■□□□□ 0.01
GABREP78334 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.13■□□□□ 0.01
GABREP78334 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.13■□□□□ 0.01
GABREP78334 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
GABREP78334 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABREP78334 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 AL603756.1-201ENST00000606511 2163 ntBASIC15.12■□□□□ 0.01
GABREP78334 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.12■□□□□ 0.01
GABREP78334 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
GABREP78334 AC007551.1-201ENST00000457394 519 ntBASIC15.12■□□□□ 0.01
GABREP78334 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.12■□□□□ 0.01
GABREP78334 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.12■□□□□ 0.01
GABREP78334 AC010328.2-201ENST00000597698 1111 ntBASIC15.12■□□□□ 0.01
GABREP78334 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms