Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 AP003680.1-201ENST00000598970 3660 ntBASIC14.43□□□□□ -0.1
RPS4XP62701 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS4XP62701 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RPS4XP62701 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RPS4XP62701 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS4XP62701 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS4XP62701 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS4XP62701 REXO1L1P-202ENST00000608646 1974 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 AC103702.1-201ENST00000548801 2630 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 HLA-H-201ENST00000383620 1096 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS4XP62701 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS4XP62701 EEF1DP4-201ENST00000446006 880 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 RNA5SP410-201ENST00000516285 106 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 IGHV3-62-201ENST00000520057 340 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS4XP62701 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.42□□□□□ -0.1
RPS4XP62701 AC093520.2-201ENST00000561830 333 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.42□□□□□ -0.1
RPS4XP62701 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 Z92544.3-201ENST00000624747 417 ntBASIC14.42□□□□□ -0.1
RPS4XP62701 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RPS4XP62701 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.42□□□□□ -0.1
RPS4XP62701 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RPS4XP62701 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
RPS4XP62701 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
RPS4XP62701 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPS4XP62701 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RPS4XP62701 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 AC090616.6-203ENST00000579186 1945 ntBASIC14.41□□□□□ -0.1
RPS4XP62701 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS4XP62701 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS4XP62701 AC069335.1-201ENST00000489972 472 ntBASIC14.41□□□□□ -0.1
RPS4XP62701 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.41□□□□□ -0.1
RPS4XP62701 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms