Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TPM3P06753 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.99■□□□□ 0.47
TPM3P06753 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.99■□□□□ 0.47
TPM3P06753 CICP4-201ENST00000447359 2812 ntBASIC17.99■□□□□ 0.47
TPM3P06753 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.98■□□□□ 0.47
TPM3P06753 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TPM3P06753 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 HAUS4P1-201ENST00000406739 1145 ntBASIC17.98■□□□□ 0.47
TPM3P06753 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.98■□□□□ 0.47
TPM3P06753 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.98■□□□□ 0.47
TPM3P06753 SART3-203ENST00000546611 1184 ntBASIC17.98■□□□□ 0.47
TPM3P06753 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TPM3P06753 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 AL732292.2-201ENST00000609649 430 ntBASIC17.98■□□□□ 0.47
TPM3P06753 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.98■□□□□ 0.47
TPM3P06753 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.98■□□□□ 0.47
TPM3P06753 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
TPM3P06753 LINC00552-201ENST00000625151 2579 ntBASIC17.98■□□□□ 0.47
TPM3P06753 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TPM3P06753 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM3P06753 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TPM3P06753 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 AC104581.4-201ENST00000623126 3052 ntBASIC17.97■□□□□ 0.47
TPM3P06753 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 AC112693.3-201ENST00000624819 1983 ntBASIC17.97■□□□□ 0.47
TPM3P06753 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM3P06753 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.97■□□□□ 0.47
TPM3P06753 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM3P06753 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
TPM3P06753 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM3P06753 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.97■□□□□ 0.47
TPM3P06753 RPS15P9-201ENST00000494093 319 ntBASIC17.97■□□□□ 0.47
TPM3P06753 FOSL1P1-201ENST00000511041 816 ntBASIC17.97■□□□□ 0.47
TPM3P06753 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM3P06753 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM3P06753 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TPM3P06753 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM3P06753 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms