Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 KRT18P67-201ENST00000432816 1264 ntBASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 AC108751.1-201ENST00000490852 363 ntBASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 AC012313.10-201ENST00000623509 926 ntBASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 AC117500.6-201ENST00000624871 588 ntBASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.52■□□□□ 0.56
GOLGA6L4A6NEF3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GOLGA6L4A6NEF3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AC006486.2-201ENST00000624246 2199 ntBASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AC092910.1-201ENST00000482027 1129 ntBASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GOLGA6L4A6NEF3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 AL121912.1-201ENST00000603683 238 ntBASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 AL109954.1-202ENST00000564051 2148 ntBASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
GOLGA6L4A6NEF3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
GOLGA6L4A6NEF3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms